SNP annotation Sample Clauses

SNP annotation. Using the SNP flanking regions derived from the improved reference genome, complete SNP-containing sequences have been compared to the genetic codes of sister taxa published in online databases (BLAST, Altschul et al. 1997), thereby fulfilling several requirements from Phase 4 Task 3. From the 384 SNPs selected for additional Phase 4 activities, 73 were found to be significantly similar to published gene sequences. All sequence matches aligned with genes annotated for bony fish species, indicating a high level of sequencing accuracy. Of the 73 matches, only 2 sequences aligned with those from previously published BFT sequences, both of which were mitochondrial genes. This is an indication that a great deal of genomic investigation is still required for Thunnus thynnus. Among the aligned sequences are genes associated with metabolism, muscle and bone growth, immune response, embryonic and larval development, vision, muscle performance, body weight and fat and cell communication.
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